ReactomeContentService4R - Interface for the Reactome Content Service
Reactome is a free, open-source, open access, curated and peer-reviewed knowledgebase of bio-molecular pathways. This package is to interact with the Reactome Content Service API. Pre-built functions would allow users to retrieve data and images that consist of proteins, pathways, and other molecules related to a specific gene or entity in Reactome.
Last updated 27 days ago
dataimportpathwaysreactome
5.68 score 4 stars 1 packages 9 scripts 226 downloadsReactomeGraph4R - Interface for the Reactome Graph Database
Pathways, reactions, and biological entities in Reactome knowledge are systematically represented as an ordered network. Instances are represented as nodes and relationships between instances as edges; they are all stored in the Reactome Graph Database. This package serves as an interface to query the interconnected data from a local Neo4j database, with the aim of minimizing the usage of Neo4j Cypher queries.
Last updated 27 days ago
dataimportpathwaysreactomenetworkgraphandnetwork
5.26 score 6 stars 6 scripts 115 downloads